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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0162s0440.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 462aa MW: 51847.4 Da PI: 6.1751 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.6 | 1.5e-33 | 3 | 131 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 p+GfrFhPt ee++++yL++k+eg++ ++++i e+ ++y+ +Pwd+p ++++ ++ wyfF++ d k+a gk nr+tk+g Wk tg SapurV1A.0162s0440.1.p 3 PVGFRFHPTVEEIIDYYLANKLEGRDYLVDDHIGEIdHLYQKDPWDIP-EFESADRVWYFFCRLDFKHADGKLINRKTKNGNWKLTG 88 89************************999999****6699********.778899******************************** PP NAM 88 kdkevlsk.kgelvglkktLvfykg..rapkgektdWvmheyr 127 +++++ ++e++g+k+ Lvf+++ ++k + t Wv+he++ SapurV1A.0162s0440.1.p 89 MPRDIKRGgTNEVIGTKRNLVFHQKcpASKKLVGTGWVIHEFQ 131 ******9866778**********76445666679********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 38.573 | 2 | 150 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.06E-35 | 2 | 148 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.7E-20 | 3 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence Send to blast |
MTPVGFRFHP TVEEIIDYYL ANKLEGRDYL VDDHIGEIDH LYQKDPWDIP EFESADRVWY 60 FFCRLDFKHA DGKLINRKTK NGNWKLTGMP RDIKRGGTNE VIGTKRNLVF HQKCPASKKL 120 VGTGWVIHEF QSRISPPDER ALVLCKLKDR GDKSAADLPN DEGEASLFMG SDFDNNAAET 180 HNREVDELWR LSLINSDEDD INFSLPLQSQ IHLQNSLVGE EDLHLADSFL VFPDEYGSEN 240 AAFSHPSTYT LQSGSENAAF SHPSTYILQS SSHAYEEPAN LYGGHGDLKI ARQLQMAPGD 300 DILLMGASSM GSTTATRHEH IESMQSGGEV IQETRQPLPP LRMPETRQPR PPTPVMAPKF 360 VEREKVSHKD IPFQGMISRS FIPKAEVGIK ESSGIAESDR KIVPVTNPKP RSNDSARKGR 420 FIHHETTISS HRSCPPSVYL LNAVLGVVLF LIMLREALIV H* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-19 | 3 | 131 | 16 | 139 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002320907.2 | 1e-157 | hypothetical protein POPTR_0014s10320g | ||||
TrEMBL | B9I964 | 1e-157 | B9I964_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0014s10320.1 | 1e-157 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14584 | 7 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01550.1 | 2e-30 | NAC domain containing protein 69 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0162s0440.1.p |